Click on a chromosome for a closer view
Ensembl Mouse is based on the NCBI m34 mouse assembly (freeze May 17, 2005, strain C57BL/6J).
The Mouse Genome Sequencing Consortium is a joint project between
The Whitehead Institute/MIT Center for Genome Research,
The Washington University Genome Sequencing Center,
The Wellcome Trust Sanger Institute
and EMBL - EBI to provide the Mouse genome sequence to the world.
We work closely with other Mouse groups to provide an integrated resource (see below for credits).
This site provides a full Ensembl gene build for the above assembly. There are some major changes in the assembly; for more details see the NCBI build statistics . The un-assembled pieces of the Y-chromosome will probably be re-integrated in the upcoming build 35.
Modifications to the systems have further improved the gene set. More than 93% of known genes from build m33 retain the same Ensembl gene ids in this release. Of novel genes only 55% of identifiers are retained, half of those lost were pseudogenes.
Gene names have been projected across orthologues in the form.
Read more...
| Assembly: | NCBI m34, May 2005 |
| Genebuild: | Ensembl, Mar 2005 |
| Database version: | 37.34e |
| Known genes: | 20,063 |
| Novel genes: | 5,550 |
| Pseudogenes: | 1,383 |
| RNA genes: | 1,598 |
| Genscan gene predictions: | 81,307 |
| Gene exons: | 245,205 |
| Gene transcripts: | 37,854 |
| Base Pairs: | 2,998,085,161 |
| Golden Path Length: | 2,604,449,128 |
| Most common InterPro domains: | Top 40 Top 500 |
© 2008 WTSI / EBI. Ensembl is available to download for public use - please see the code licence for details.
